velocyto-team velocyto.R issues

velocyto-team / velocyto.R

RNA velocity estimation in R

http://velocyto.org

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issues

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Compilation failure

#211 davidjquispe opened 3 months ago
2
top spliced genes

#210 Flu09 opened 3 months ago
0
libhdf5_hl.so.8

#209 robin-sto closed 8 months ago
0
cannot find -lboost_filesystem

#208 robin-sto opened 8 months ago
2
Problem Installing Mac M3 Sonoma

#207 joshuagmedina opened 8 months ago
3
Error reading loom file converted from Seurat object for Velocity

#206 peictang opened 8 months ago
0
Could we apply this method to Visium data (No polyA-tailed method)?

#205 oghzzang opened 10 months ago
0
Integration of 10x PolyA Data with Fixed RNA Profiling

#204 ckfromCN opened 11 months ago
0
can I use ensembl IDs instead of gene names

#203 breelege opened 1 year ago
0
macos-install

#202 Anacristina0914 opened 1 year ago
0
Could not retrieve index file

#201 sanderslhc opened 1 year ago
0
Can we set colors for cell borders in show.velocity.on.embedding.cor?

#200 stanaka6 opened 1 year ago
0
Running velocyto on adata object

#199 AnuSitu1 opened 1 year ago
0
Update Makevars

#198 aishwaryashiv10 closed 1 year ago
0
Links to tutorials broken

#197 rachelzoeb opened 1 year ago
0
problem installing

#196 ElenaSLuis opened 1 year ago
3
filter.genes.by.cluster.expression error

#195 Junedays opened 1 year ago
0
fixed typo on func

#194 rekren opened 1 year ago
0
visualize the plot show.velocity.on.embedding.cor

#193 yamihn opened 1 year ago
0
ERROR: compilation failed for package 'velocyto.R'

#192 geng-lee opened 1 year ago
0
Installation Problems (Lack of 'lboost-filesystem')

#191 BennyHz opened 2 years ago
3
time required to get the output of plot

#190 feanaros opened 2 years ago
0
velocyto installation error

#189 TamaraSall opened 2 years ago
0
RunVelocity() requested size is too large; suggest to enable ARMA_64BIT_WORD

#188 Totoro-chen opened 2 years ago
0
velocyto.R installation error "velocyto.R_0.6.tar.gz had non-zero exit status"

#187 galaxyeee opened 2 years ago
0
Do I need to normalize unspliced reads as long as I've normalized spliced reads?

#186 dg520 opened 2 years ago
0
plot warning

#185 vicscott opened 2 years ago
1
Separating intron exon bam

#184 DDoddamani opened 2 years ago
0
ERROR - Can not locate the barcodes.tsv file!

#183 chrismahony opened 2 years ago
3
Error while running show.velocity (rep(x, sum(vg)))

#182 DRLMQ opened 2 years ago
0
Normalization of the spliced and unspliced assays

#181 rythi4 opened 2 years ago
0
Illegal instruction (core dumped)

#180 chrismahony closed 2 years ago
0
What folders are needed when running 10X?

#179 HocheolJang426 opened 2 years ago
1
Question for combing loom files

#178 Huimin721 opened 2 years ago
0
Bus error (core dumped)

#177 danli349 opened 2 years ago
0
How to save loom file and output .loom file

#176 Roeply opened 2 years ago
0
filtering

#175 elengss opened 2 years ago
0
Installation Ubuntu 20.04 R4.1

#174 colindaven opened 2 years ago
1
Running Error

#173 danjong99 opened 3 years ago
0
Error with main velocity estimation

#172 Battamama opened 3 years ago
0
Error: cannot allocate vector of size 88.4 Gb Execution halted

#171 yanglq-bio opened 3 years ago
0
dyld: Library not loaded: @rpath/libcrypto.1.0.0.dylib dyld

#170 cguetta opened 3 years ago
0
Is the negative slope taken by velocyto.R when a cell is below the steady state line?

#169 eregenyi opened 3 years ago
0
installation of package ‘/tmp/RtmpIwaJfu/file44453795c874/velocyto.R_0.6.tar.gz’ had non-zero exit status

#168 avilella closed 3 years ago
1
Problem installing VelocytoR in macOS

#167 ahmadsam66 opened 3 years ago
12
Analysis speed up?

#166 woodyNsinbad opened 3 years ago
0
read.loom.matrices failed when reading loom file

#165 zerogeass opened 3 years ago
4
How to generate pseudotime of cells

#164 mabaoweireadingene opened 3 years ago
0
Can't install velocyto.R on remote R server

#163 annaliem closed 3 years ago
0
How to generate pseudotime of cells

#162 mabaoweireadingene opened 3 years ago
0