Closed HB-pencil-zero closed 1 year ago
Besides that, the peptides dataset provides a map of peptide chains and atoms, but I am not sure if I can get the amino acid linkages from it. What I mean is that it seems difficult to tell which amino acid the atom belongs to just from the atom map and the amino acid sequence.
Another thing is the experimental part, where I noticed "Each experiment was run with 4 different seeds. All MP-GNN models have 5 layers, while the Transformer-based models have 4 layers". I don't particularly understand what reason make this difference.
Hello, I found that there are identifier attributes in the peptide dataset, but I don't seem to find them described in the paper, could you please tell me what they are? Best regards.