LAB–QA2GO - A free, easy-to-use toolbox for the quality assessment of magnetic resonance imaging data
LAB–QA2GO is a light-weighted virtual machine which provides scripts for fully automated QA analyses of phantom and human datasets. This virtual machine is ready for analysis by starting it the first time. With minimal configuration in the guided web-interface the first analysis can start within 10 minutes, while adapting to local phantoms and needs is easily possible.
The LAB–QA2GO tool is a virtual machine based on Virtual Box. The image can be downloaded here. After downloading the tool, you have to integrate the virtual machine into your Virtual Box client.
A set of sample data can be downloaded here.
A list of all LAB-QA2GO versions is listed here.
The current version is 0.81.
This is the first version of this tool. It is adapted to the data of our MRI lab at the University of Marburg. If you got a problem or questions just contact me, so that we can help you.
You can contact us using slack. Our channel is available at https://lab-qa2go.slack.com/. Feel free to contact us to invite you to this channel. You can join the channel here.
LAB-QA2GO is licensed under the BSD license for phantom data analysis.
For human data analysis FSL routines are used in the current version. It is therefore not allowed to use LAB-QA2GO in commercial setup, when you are interested in human data analysis.
Furthermore LAB-QA2GO is not intended as a clinical tool. It does not replace maintenance by a trained / skilled professional.
When using MRIQC, please include the following citation:
Vogelbacher, C., Bopp, M. H., Schuster, V., Herholz, P., Jansen, A., & Sommer, J. (2019). LAB–QA2GO: A free, easy-to-use toolbox for the quality assessment of magnetic resonance imaging data. Frontiers in Neuroscience, 13, 688. doi: https://doi.org/10.3389/fnins.2019.00688
LAB–QA2GO: A free, easy-to-use toolbox for the quality assessment of magnetic resonance imaging data Christoph Vogelbacher, Miriam H. A. Bopp, Verena Schuster, Peer Herholz, Jens Sommer, Andreas Jansen bioRxiv 546564; doi: https://doi.org/10.1101/546564
Vogelbacher, Christoph; Bopp, Miriam; Schuster, Verena; Herholz, Peer; Jansen, Andreas; Sommer, Jens (2019): LAB–QA2GO: A free, easy-to-use toolbox for the quality assessment of magnetic resonance imaging data. figshare. Poster on OHBM 2019. https://doi.org/10.6084/m9.figshare.8305964.v2
We would like to thank our collaborators Bhalerao Gaurav Vivek and Pravesh Parekh from National Institute of Mental Health and Neurosciences (NIMHANS) Bengaluru, India.
Laboratory for Multimodal Neuroimaging | LMN
Copyright 2015-2019, Christoph Vogelbacher. Last updated on 2019-05-27.