weecology MATSS issues - Githubissues

weecology / MATSS

R Package for Macroecological Analysis of Time Series Structure (MATSS)

https://weecology.github.io/MATSS

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Add functions for data post-processing

#178 ha0ye closed 4 years ago
1
Address drake warning on non-hardcoded file paths

#177 ha0ye opened 4 years ago
2
Add note on version control to compendium readme

#176 ha0ye closed 4 years ago
0
Automate compendium build

#175 ha0ye closed 4 years ago
0
update datasets to include class

#174 ha0ye closed 4 years ago
0
if the download directory doesn't exist, `install_retriever_data` should give a warning and offer to create it

#173 ha0ye closed 4 years ago
0
updates to creating compendia

#172 ha0ye closed 4 years ago
1
Create public demo of MATSS compendium

#171 ha0ye closed 4 years ago
0
Should we set a default license in create_MATSS_compendium?

#170 ha0ye closed 4 years ago
1
Add class type to MATSS datasets

#169 ha0ye closed 4 years ago
4
Refactor drake plan functions to make use of dynamic branching

#168 ha0ye opened 4 years ago
0
Switch over included datasets to download via `retriever`

#167 ha0ye opened 4 years ago
1
[WIP] include citation and location as required dataset fields

#166 ha0ye closed 4 years ago
0
Check processing of BBS data into communities

#165 ha0ye closed 4 years ago
7
Include species table in metadata for Jornada rodents

#164 ha0ye closed 4 years ago
0
Switch source of gpdd data to retriever from rgpdd

#163 ha0ye closed 4 years ago
1
compile citations from datasets in drake plan

#162 ha0ye closed 4 years ago
1
[WIP] Include citation info in datasets

#161 ha0ye closed 4 years ago
1
Grab citation info from retriever as part of downloading datasets

#160 ha0ye closed 4 years ago
1
Update data & metadata format

#159 ha0ye closed 4 years ago
0
Update research compendium template

#158 ha0ye closed 4 years ago
0
Retrieve external data

#157 ha0ye opened 4 years ago
1
Implement a binary flag for designating individual populations vs. communities

#156 ha0ye closed 4 years ago
2
Verify re-sharing and licenses for data

#155 ha0ye closed 4 years ago
3
Programmatic listing of datasets

#154 ha0ye opened 4 years ago
0
Verify completeness of metadata

#153 ha0ye opened 4 years ago
0
retriever functionality broken on Travis (again)

#152 ha0ye closed 4 years ago
1
update BioTime metadata import

#151 ha0ye closed 4 years ago
0
Compendium features

#150 ha0ye closed 4 years ago
0
Investigate sources of Drake cache invalidation

#149 ha0ye closed 5 years ago
1
Merge in LPI data from MATSS-forecasting

#148 ha0ye opened 5 years ago
6
Roadmap (infrastructure paper)

#147 ha0ye closed 4 years ago
0
Plans to integrate Living Planet Index database?

#146 caseyyoungflesh closed 5 years ago
2
Switch to conda based installs of Python and retriever

#145 ethanwhite closed 5 years ago
1
include species metadata in BioTime processed datasets

#144 ha0ye closed 4 years ago
1
Implement pre-processing of Biotime data

#143 ha0ye closed 5 years ago
1
Update source for GPDD data

#142 ha0ye closed 4 years ago
3
HiPerGator vignette links to lab-wiki

#141 ha0ye opened 5 years ago
0
Review acknowledgements with team for correctness.

#140 ha0ye closed 4 years ago
0
Collecting warnings/errors for BioTime datasets

#139 ha0ye closed 4 years ago
2
Add functionality to prep Biotime datasets, similar to BBS

#138 ha0ye closed 5 years ago
0
processing hiccup with bbs data (region 6, route 49)

#137 ha0ye closed 5 years ago
3
Add functions to handle and detect non-integer timestep data

#136 ha0ye closed 4 years ago
3
Add a quick error check for `install_retriever_data`

#135 ha0ye closed 5 years ago
0
Add Biotime data, closes #116

#134 gmyenni closed 5 years ago
2
Add summary stats report template

#133 ha0ye closed 5 years ago
1
Update build_plans.R

#132 diazrenata closed 5 years ago
1
fix portal_data function and update tests

#131 ha0ye closed 5 years ago
1
BBS by route patch

#130 ha0ye closed 5 years ago
2
Remove 1991 (all NA's) from Cowley data

#129 diazrenata closed 5 years ago
4