Open hzongyao opened 3 years ago
I wonder how to prepare the cnv.referAdjMat if I provide normal sample expression matrix by cnv.ref.data parameter ? Thank you !
cnv.referAdjMat
cnv.ref.data
You can run your normal sample data by Seurat pipeline, and use the generated SNN matrix (seurat_obj@graphs$RNA_snn) as the cnv.referAdjMat.
seurat_obj@graphs$RNA_snn
I wonder how to prepare the
cnv.referAdjMat
if I provide normal sample expression matrix bycnv.ref.data
parameter ? Thank you !