Open wulc21 opened 2 years ago
Well, I have solved the problem by use the following code in Terminal
"pip install xgboost==1.2.0"
based on the Warning Message:WARNING: amalgamation/../src/learner.cc:1095: Starting in XGBoost 1.3.0, the default evaluation metric used with the objective 'binary:logistic' was changed from 'error' to 'logloss'. Explicitly set eval_metric if you'd like to restore the old behavior.
after that I restart R and retried the runScAnnotation code and got it.
anno.results <- runScAnnotation(
Warning message: Transformation introduced infinite values in continuous x-axis
However, in this process the warning message sill exist, so why? is it normal? thank you very much.
Thanks for your use. The warning message is normal, which is due to that when plotting under log-scale, zero will be transformed to infinite values. It doesn't affect the result.
Dear professor, when I run runScAnnotation function,I encounter the error message as follows, can you help me to solve the problem, thank you very much.