Hey @wguo-research, thank you for sharing this tool! Is it possible to apply this method for spatial 10X data? I saw it referenced in spatial transcriptomic papers. I started with runScStatistics, which runs for a bit then produces the following error:
....
[2023-01-25 20:25:27] -----: mito & ribo & diss distribution plot
[2023-01-25 20:25:29] -----: gene statistics
[2023-01-25 20:25:29] -----: gene proportion plot
Error in h(simpleError(msg, call)) :
error in evaluating the argument 'x' in selecting a method for function 'as.matrix': error in evaluating the argument 'x' in selecting a method for function 't': invalid character indexing
In addition: Warning messages:
1: In xtfrm.data.frame(x) : cannot xtfrm data frames
2: In min(outliers) : no non-missing arguments to min; returning Inf
Hey @wguo-research, thank you for sharing this tool! Is it possible to apply this method for spatial 10X data? I saw it referenced in spatial transcriptomic papers. I started with runScStatistics, which runs for a bit then produces the following error: