whuang37 / biondi_body_client

A client used to annotate and record the morphology of biondi bodies in the choroid plexus.
0 stars 0 forks source link

1. Table of Contents

2. Biondi Body Morphology Client

The Biondi Body Morphology Client is an image screenshotter and annotation software packed into one package. This program is primarily used to categorize the different morphologies of biondi bodies from the epithelium of the choroid plexus.

Features

2.1. Installation

2.2. Usage

1) This is the opening window of the application. Open Previous Folder continues editing a previously initiated case while Initiate Folder initiates a new case.

github-small

2) When you open a folder you will be greeted with your grid file and a grid jumper at the bottom. Hit the forward and backward buttons to move forward or backward in your grid order and jump to them to see that grid. Mark that grid as done with the finished checkbox and save it to the checkbox.

3) Right click on the image to add a marker at the place. In doing so, a popup will show up for you to enter relevant information about the biondi body you are marking.

4) After pressing ok in the popup, a screenshot editor will show up below. Click the brush tool to draw on the image and move around the coordinates with the top-left button. Press save to save the annotation and body image.

5) The image viewer has a slew of different functions for your use. At the top is a series of filter options to filter select biondi bodies. On the right is a list of biondi bodies. When you click on one, the image of the body and its annotation will load on the right as well as all the information about the body at the bottom. Edit the information, edit the image, or delete the image entirely with the corresponding buttons at the bottom.

github-small

3. Support

If you find any bugs please open an issue here by including information about the bug and how to reproduce it.

If you'd like to request more functions feel free by opening an issue here. Please include samples and corresponding results for our review.

4. Contributing

We are currently not looking for contributions but if any problems/suggestion arise, open an issue here so we can address it accordingly.

5. Authors and Acknowledgements

Development on the Biondi Body Morphology Client by whuang37 and TheSamG.