PFOCR for prioritization of BioThings Explorer (BTE) TRAPI results
This repo is for PFOCR for prioritization / clustering GitHub issue #538.
The goal is to use PFOCR to do prioritization and/or grouping of trapi results using the following strategy:
- initially explore the idea using Jupyter notebooks to post-process trapi results for sample queries
- if the results from 1. are good, move the processing from the Jupyter notebooks into the JS code (probably in query_graph_handler). This code could run in conjunction with the actual calling of the APIs to get records, and potentially also in part afterwards to supplement the trapi results
- if the results from 2. are good, we can explore how to extend the ideas to the UI
Requirements
- URL with TRAPI results (json format)
- Access to the Dropbox folder with PFOCR data.
Details
This repo is build from the initial exploration done by Anders Riutta.
PET_notebook_v1.ipynb is a Jupyter notebook that addresses the requirements in issue #538.