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williamritchie
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IRFinder
Detecting intron retention from RNA-Seq experiments
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empty file and IR quantification error
#41
sliva1
closed
6 years ago
10
Extract IRratio from DESeq2Object
#40
mebbert
closed
6 years ago
6
Small bug in DESeq2Constructer: "assay colnames() must be NULL or equal colData rownames()"
#39
mebbert
closed
6 years ago
4
using DESeq2 with IRFinder
#38
jessh1
closed
6 years ago
3
IRBase error
#37
dsanleo
closed
6 years ago
2
IRBase error occurs submitting example query
#36
malcook
closed
6 years ago
7
Problem with Mapability step of BuildRefProcess on hg38
#35
cbenoitp
closed
6 years ago
2
IRFinder 1.2.4
#34
dg520
closed
6 years ago
0
Question about the GLM-based analysis with DESeq2
#33
tommiRa
closed
6 years ago
2
BuildRefFromEnsembl: No such file or directory
#32
Alan1389
closed
6 years ago
4
BuildRefProcess mode problem
#31
rachelf45
closed
6 years ago
10
correcting for multiple testing?
#30
aprice26
closed
6 years ago
5
IRFinder -m BAM error which reported "Broken pipe" and "Segmentation fault"
#29
noahpieta
closed
6 years ago
7
Installation Error
#28
rf1527
closed
7 years ago
2
error in MacOS: "IRFinder: line 192: /proc/meminfo: No such file or directory"
#27
aambioinfo
closed
5 years ago
19
IRFinder-1.2.3
#26
dg520
closed
7 years ago
0
IRFinder-1.2.3
#25
dg520
closed
7 years ago
0
IRFinder stops: broken pipe
#24
ChrisAi89
closed
7 years ago
15
Building reference index make empty files
#23
florealcab
closed
6 years ago
1
Using Tophat2 results
#22
ali0010
closed
7 years ago
1
added executable permissions
#21
dg520
closed
7 years ago
0
IRFinder 1.2.2
#20
dg520
closed
7 years ago
0
ref-cover.bed missing
#19
OSchwich
closed
7 years ago
2
IRFinder-1.2.1
#18
dg520
closed
7 years ago
0
IRFinder 1.2.1
#17
dg520
closed
7 years ago
0
Some bugs in the program "DESeq2Constructor.R"
#16
HaiHuaLiu
closed
7 years ago
8
Crash IRFinder with 0 informative base introns
#15
dwishsan
closed
6 years ago
3
IRF index is empty
#14
vanhzh
closed
7 years ago
6
reference index
#13
YongchaoDou
closed
7 years ago
9
Update README
#12
dg520
closed
7 years ago
0
Create README.md
#11
dg520
closed
7 years ago
0
IRFinder 1.2.0
#10
dg520
closed
7 years ago
0
question
#9
jano15
closed
7 years ago
1
Disable unsorted output
#8
jthomas5062
closed
7 years ago
3
tophat
#7
lmanchon
closed
7 years ago
8
IRFinder-1.0.0/bin/IRFinder: line 547: 57420 Broken pipe
#6
yuxinghai
closed
7 years ago
3
Failure to download gtf from newest Ensembl release
#5
slebedeva
closed
7 years ago
5
Fixed error which leads to all new ensembl annotations not being able…
#4
dvanic
closed
7 years ago
1
DESeq2 support
#3
dvanic
closed
7 years ago
1
Local annotation
#2
JLTrincado
closed
7 years ago
3
Add files via upload
#1
williamritchie
closed
8 years ago
0
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