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workflow4metabolomics
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mtbls-dwnld
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Upgrade isatools version
#53
pkrog
closed
3 years ago
0
Move this tool into tools-metabolomics
#52
pkrog
opened
4 years ago
0
Add targets for publishing on test toolshed.
#51
pkrog
closed
4 years ago
0
Update download of private studies
#50
pkrog
closed
4 years ago
0
Test slicer
#49
pkrog
closed
4 years ago
0
Pass Planemo test in Travis-CI
#48
pkrog
closed
4 years ago
0
Integration inside W4M instance
#47
pkrog
opened
4 years ago
31
Hotfix/bug with absolute path for zip file
#46
pkrog
closed
6 years ago
0
Failure when specifying `-T` with absolute path for output (`-o`).
#45
pkrog
closed
6 years ago
0
Feature/write directly to output path
#44
pkrog
closed
6 years ago
0
Write directly in specified output path
#43
pkrog
closed
6 years ago
1
Include aspera information
#42
sneumann
closed
6 years ago
1
Correct detection of Alpine distribution.
#41
pkrog
closed
6 years ago
0
Turn off GNU wget progress option on Alpine.
#40
pkrog
closed
6 years ago
0
Make tests on private study optional.
#39
pkrog
closed
6 years ago
0
Upgrade to aspera 3.7.7 for testing in Travis-CI.
#38
pkrog
closed
6 years ago
0
Use https URLs
#37
pkrog
closed
6 years ago
0
Transform metadata only opt in radio buttons.
#36
pkrog
closed
6 years ago
0
Factor slicing of data files
#35
pkrog
closed
6 years ago
0
Test metadata only download for aspera
#34
pkrog
closed
6 years ago
0
Enable factor value slicing in XML tool interface.
#33
pkrog
closed
6 years ago
0
Usability: avoid double negation "Download only the metadata"
#32
sneumann
closed
6 years ago
1
Add requirements pandas and isatools to XML tool.
#31
pkrog
closed
6 years ago
1
Slice metadata files (a_* m_* s_*) on factor value.
#30
pkrog
opened
6 years ago
0
Integrate `run_mtblisa.py` script from `isatools-galaxy` repos.
#29
pkrog
closed
6 years ago
0
Add option in `mtbls-dwnld` for specifying factor value. `-f factor=value`
#28
pkrog
closed
6 years ago
0
Enable downloading of selected data files.
#27
pkrog
closed
6 years ago
0
Update http URLs
#26
pkrog
closed
6 years ago
1
More outputs / New tool to access files inside a study
#25
gabrielctn
closed
6 years ago
13
Unable to unzip a MTBLS archive
#24
gabrielctn
closed
6 years ago
2
Feature/aspera public token
#23
pkrog
closed
6 years ago
0
Use isa-tab for output instead of isa.
#22
pkrog
closed
6 years ago
0
Use isa-tab instead of isa as input type
#21
pkrog
closed
6 years ago
0
Make planemo test works on Travis-CI
#20
pkrog
closed
4 years ago
1
Feature/galaxy isa datatype
#19
pkrog
closed
6 years ago
0
Clarify requirements for private studies
#18
sneumann
closed
6 years ago
0
Enable aspera to download only the metadata
#17
pkrog
closed
6 years ago
1
Create new Galaxy tool for downloading Metabolights study and create a native ISA dataset from it
#16
pkrog
closed
6 years ago
1
Translate mtbls-dwnld script into Python
#15
pkrog
closed
6 years ago
1
Integrate isa-api isatab2w4m converter code into isatab2w4m.py script
#14
pkrog
closed
6 years ago
1
Extend isatab2w4m.py to Json type
#13
pkrog
closed
6 years ago
1
Write Galaxy Tool XML that uses isatab2w4m
#12
pkrog
closed
6 years ago
1
Feature/quiet option
#11
pkrog
closed
6 years ago
0
Check if -qq option is necessary
#10
pkrog
closed
6 years ago
0
quiet option
#9
pkrog
closed
6 years ago
0
Filtering NA values on multiple columns does nothing
#8
pkrog
closed
6 years ago
1
Failure when filtering on a column with only NA values
#7
pkrog
closed
6 years ago
2
Remove unwanted output file "Metabolights Downloader"
#6
pkrog
closed
6 years ago
1
Travis-CI test fails on unicode char error
#5
pkrog
closed
6 years ago
3
Switching from R to Python
#4
pkrog
closed
6 years ago
17
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