wtmatlock / flanker

Gene-flank analysis tool
MIT License
25 stars 6 forks source link

Tests with CI, packaging stuff, docs #37

Closed bede closed 3 years ago

bede commented 3 years ago

Conda finds solving for Abricate difficult which made getting tests to pass a pain. By default on Ubuntu, it tries to install Abricate 0.8 which has a different output format and crashes flanker. Pinning 1.0.1 takes so long to solve on Ubuntu that GH Actions times out. But definitely working on MacOS and most likely Ubuntu too.

See commits for further details.