wtsi-npg / npg_conda

NPG Conda recipes and tools
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bowtie - executables needed to building a eference are not copied to bin #220

Closed mgcam closed 3 years ago

mgcam commented 3 years ago

The recipe copies to the bin the top-level executable that is used for building references, see https://github.com/wtsi-npg/npg_conda/blob/55dc4030c826ccbe79966c5538e847af8066f8bd/recipes/bowtie/1.2.2/build.sh#L14. It seems during the build other executables are called. The correct command for copying all of them might be cp bowtie-build* "$PREFIX/bin/"

bowtie2 might have a similar problem.