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wwood
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CoverM
Read coverage calculator for metagenomics
GNU General Public License v3.0
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Running multiple methods with one command
#21
elizabethmcd
closed
4 years ago
2
-m metabat fails with --no-zeros
#20
wwood
opened
4 years ago
0
CoverM and jgi_summarize_bam_contig_depths give different outputs
#19
apcamargo
closed
4 years ago
4
Relative abundance estimates double when using --genome-definitions and provided bam file
#18
caity-s
closed
4 years ago
6
thread 'main' panicked at 'index out of bounds
#17
slaperriere
closed
4 years ago
13
Gene abundance
#16
Thexiyang
opened
4 years ago
3
Trimmed Mean larger than Mean
#15
Thexiyang
closed
5 years ago
8
adding in set_threads option
#14
rhysnewell
closed
5 years ago
4
relative-abundance
#13
daisyzhangsysu
closed
5 years ago
1
relative_abundance
#12
ucassee
closed
4 years ago
15
Calculation of RPKM
#11
jerceyli
closed
5 years ago
3
Calculation of relative abundance
#10
ssun6
closed
5 years ago
6
bam_generator, shard_bam_generator: Use bwa's -p at front of cmd.
#9
wwood
closed
5 years ago
0
Shards
#8
rhysnewell
closed
5 years ago
7
Shards
#7
rhysnewell
closed
5 years ago
1
sparse vs dense help needs improvement
#6
wwood
closed
5 years ago
0
print zeros when no contig is covered
#5
wwood
closed
5 years ago
1
genome should fail earlier when there's no specification
#4
wwood
closed
6 years ago
1
Box vectors
#3
rhysnewell
closed
6 years ago
6
Failed to install CoverM
#2
timbalam
closed
6 years ago
11
Adding Headers and multiple method outputs
#1
rhysnewell
closed
6 years ago
8
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