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xfengnefx
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hifiasm-meta
hifiasm_meta - de novo metagenome assembler, based on hifiasm, a haplotype-resolved de novo assembler for PacBio Hifi reads.
MIT License
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Output files for binning
#37
YannDussert
opened
2 days ago
2
New release for r73 and binning
#36
cjfields
closed
1 day ago
1
Extract “Tangled circles”
#35
Flooooooooooooower
opened
1 month ago
15
No Output
#34
xubiy
opened
1 month ago
2
Aborted (core dumped) after bin file been generated
#33
XueyunF
closed
1 month ago
1
Out Of Memory job failures with --force-rs
#32
dluecke
closed
3 months ago
6
hifiasm-meta exit!
#31
Giotto187
opened
9 months ago
1
Resistance gene not assembled in primary contig file, but is present in alternate contig file
#30
sosie100
opened
11 months ago
5
Too much RAM memory required for metagenome assembly.
#29
machalita
closed
11 months ago
5
contig coverage
#28
Sung-hub
opened
1 year ago
1
Input file?
#27
PeymanDerik
opened
1 year ago
3
Segmentation fault with conda installed 0.3-r063.2 (hifiasm code base 0.13-r308)
#26
nallsing-salk
closed
1 year ago
2
Question about read overlap parameters and usage
#25
TomHarrop
opened
1 year ago
4
Segfaults using the conda package version hamtv0.3--h5b5514e_1
#24
TomHarrop
opened
1 year ago
8
HiFi reads: Is it better to perform assembly before taxonomic and functional identification?
#23
PeymanDerik
closed
1 year ago
4
redundancy of hifiasm-meta and metaflye
#22
ye00ye
closed
1 year ago
8
r63
#21
xfengnefx
closed
1 year ago
0
gfa s-line
#20
liushanlin
closed
1 year ago
2
Is it necessary to conduct binning after assembly with HiFi reads to get MAGs?
#19
ye00ye
closed
2 years ago
2
在不去除宿主的情况下，能否组装到宿主基因组
#18
ye00ye
closed
2 years ago
2
Duplicate GFA links
#17
asl
opened
2 years ago
1
A serious error in simulated data
#16
ruoyu1123
closed
2 years ago
2
Some warnings on compilation
#15
GabeAl
closed
2 years ago
1
Update bioconda recipe to latest release
#14
fplazaonate
closed
2 years ago
2
hifiasm-meta produces redundant assemblies?
#13
fplazaonate
closed
2 years ago
6
General question regarding treatment of contained reads
#12
cjain7
closed
2 years ago
4
How to identify the circular contigs in hifiasm-meta output
#11
ihbxiongjie
closed
2 years ago
1
Problems understanding the output files
#10
zehanna
closed
2 years ago
2
No circular contigs recovered
#9
fplazaonate
closed
2 years ago
5
Potential for improvement: A great test dataset here!
#8
GabeAl
closed
2 years ago
5
Hi-C integration?
#7
olekto
closed
2 years ago
3
Good settings for enriched similar sequences
#6
suzukimicro
closed
2 years ago
8
fail to Write GFA file
#5
lonestarling
closed
2 years ago
4
Extracting circular contigs
#4
proteinosome
closed
3 years ago
2
Understanding which reads contribute to contigs
#3
dportik
closed
3 years ago
4
GFA file size issue
#2
alienzj
closed
3 years ago
14
Minor improvements
#1
lh3
closed
3 years ago
0