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yana-safonova / ig_repertoire_constructor

An algorithm for error-correction of immunosequencing Illumina MiSeq reads and immunoproteogenomic analysis
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IgRepertoireConstructor Algorithm for construction of antibody repertoire from NGS data and immunoproteogenomics analysis Version: see VERSION

Developed in Center for Algorithmic Biotechnology, Saint-Petersburg State University

Current IgRepertoireConstructor contributors:

Yana Safonova,
Alexander Shlemov,
Andrey Bzikadze,
Sergey Bankevich,
Alla Lapidus, and
Pavel A. Pevzner

Also contributed:

Eugene Kurpilyansky,
Ekaterina Starostina

Installation instructions and manual can be found on the website: http://yana-safonova.github.io/ig_repertoire_constructor/

References:

Yana Safonova, Stefano Bonissone, Eugene Kurpilyansky, Ekaterina Starostina, Alla Lapidus, Jeremy Stinson, Laura DePalatis, Wendy Sandoval, Jennie Lill and Pavel A. Pevzner. IgRepertoireConstructor: a novel algorithm for antibody repertoire construction and immunoproteogenomics analysis. Bioinformatics. 2015 Jun 15;31(12):i53-i61.