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yangao07
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abPOA
abPOA: an SIMD-based C library for fast partial order alignment using adaptive band
MIT License
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link to manuscript is broken
#27
zztin
closed
3 years ago
1
abpoa segfaults when building with sse4.1 but not avx2
#26
glennhickey
closed
1 year ago
8
Merge upstream
#25
glennhickey
closed
3 years ago
0
potential issue when aligning more than 1024 sequences (v1.2.4)
#24
ekg
closed
2 years ago
5
Can't install versions later than 1.0.2 using pip on Ubuntu 20.04 LTS in Docker
#23
hcstubbe
closed
3 years ago
4
abPOA seems unstable with HOX scoring matrix
#22
glennhickey
closed
3 years ago
8
Option to switch off logging messages
#21
glennhickey
closed
3 years ago
4
Feature request: Allow specification of full scoring matrix
#20
glennhickey
closed
3 years ago
6
pip install fails on multiple machines
#19
christopher-vollmers
closed
3 years ago
3
ARM support?
#18
glennhickey
closed
2 years ago
18
MSA to GFA
#17
dbrami
closed
3 years ago
8
Incremental update of the graph
#16
huguesrichard
opened
3 years ago
8
Error in logic for read ID labeling at source node
#15
NatPRoach
closed
3 years ago
5
Is there any way to reduce memory consumption?
#14
glennhickey
opened
3 years ago
24
resurrect traceback_ok
#13
ekg
closed
3 years ago
0
propagate traceback status through ambiguous alignment
#12
ekg
closed
3 years ago
0
signal failures in traceback to handle in the calling context
#11
ekg
closed
3 years ago
0
Segmentation fault and mis-alignment issue
#10
mprous1
closed
2 years ago
3
[simd_abpoa_align_sequence_to_subgraph1] Error in cg_backtrack. (4)
#9
ekg
opened
3 years ago
17
avoid some conflicts with other projects due to _insert macros in utils.h
#8
ekg
closed
4 years ago
0
Error in cg_backtrack
#7
ekg
closed
4 years ago
4
segfault when generating GFA
#6
ekg
closed
4 years ago
3
strange Segmentation fault when trying to integrate abpoa_msa subfunctions into C++ smoothxg
#5
subwaystation
closed
4 years ago
1
Add best alignment score to abpoa_res_t
#4
subwaystation
closed
4 years ago
4
Are input QVs meaningful?
#3
armintoepfer
closed
2 years ago
5
GFA output
#2
ekg
opened
4 years ago
15
License
#1
armintoepfer
closed
4 years ago
5
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