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yerkes-gencore
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bulk_template
Template for ENPRC Genomics Core bulk RNAseq projects
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`scDblFinder()` error with R 4.3.1 and Seurat v5: `the 'as_cholmod_sparse' function does not exist in the 'Matrix' package`
#14
micahpf
opened
1 month ago
1
Overhauling the limma-edgeR-based workflow based on `p23181_Abbie_Analysis` and `p23224_Matthew_Analysis`
#13
micahpf
closed
1 month ago
1
fc thresholds are recommended for analyses with large sample sizes
#12
micahpf
opened
1 month ago
1
Dev
#11
derrik-gratz
closed
4 months ago
0
Dev
#10
derrik-gratz
closed
5 months ago
0
confirm metadata associations
#9
derrik-gratz
closed
5 months ago
0
Fixed createResTable argument specification
#8
gktharp1
closed
5 months ago
0
Dev
#7
derrik-gratz
closed
5 months ago
0
Model validation script
#6
derrik-gratz
closed
5 months ago
0
Create unified stylesheet
#5
derrik-gratz
closed
5 months ago
0
EdgeR and Limma implementation of bulk RNAseq
#4
micahpf
closed
6 months ago
10
Move genelist to analysis config
#3
derrik-gratz
closed
8 months ago
0
auto generate samplesheet from input dirs
#2
derrik-gratz
closed
8 months ago
0
running RLOG takes a long time
#1
derrik-gratz
opened
1 year ago
0