yunguan-wang / Spacia

BSD 3-Clause "New" or "Revised" License
22 stars 2 forks source link

How to run SPACIA in all cell_types #55

Open xiandxing opened 19 hours ago

xiandxing commented 19 hours ago

Since the example listed as '-rc A -sc B' within 'cell_type' in meta.data, I wonder if I could run the specific LR pair in all celltypes to find the strongest interacting cell-type pairs? Would you please give me some advice to use spacia to achieve this goal?