MK dataset clean and simulation

yyolanda / SMART

A reference-free deconvolution method for spatial transcriptomics data

MIT License

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MK dataset clean and simulation #2

Open xieaq opened 1 month ago

xieaq commented 1 month ago

Dear Dr. @yyolanda

Your simulation work is truly impressive! Could you please provide guidance or examples on how to simulate MK from single-cell resolution to spatial resolution?

Thank you!

yyolanda commented 3 weeks ago

We followed the procedure used in the STdeconvolve paper. The authors of STdeconvolve provided a very detailed tutorial at: https://jef.works/STdeconvolve/process_mpoa_data.html