zhengxwen gdsfmt issues

zhengxwen / gdsfmt

R Interface to CoreArray Genomic Data Structure (GDS) Files (Development version only)

http://www.bioconductor.org/packages/gdsfmt

18 stars 4 forks source link

issues

Newest

Newest Most commented Recently updated Oldest Least commented Least recently updated

installation fails on Alpine Linux: lseek64 and ftruncate64 not defined

#38 bastistician opened 1 week ago
2
gdsSubset and other gds object interactions are not practial for loops/parallel

#37 rbutleriii opened 3 months ago
3
In add.gdsn(ans, nm[i], val[[i]], compress = compress, closezip = closezip, : Missing characters are converted to "".

#36 jingydz opened 5 months ago
1
Check for local libs prior to building duplicates

#35 barracuda156 opened 1 year ago
2
How to add two gds files

#34 connorourke opened 3 years ago
0
Parse gds files in python

#33 The-Jacob-Lopez opened 3 years ago
0
INSTALL fails on F34 with R 4.1.0

#32 rsbivand opened 3 years ago
7
Trouble installing on HPC cluster

#31 yiyangphd opened 3 years ago
0
install error: version GLIBCXX_3.4.21 not defined in file libstdc++.so.6 with link time reference

#30 qindan2008 opened 4 years ago
1
Help wanted

#29 Sebass-DP opened 4 years ago
1
Opened GDS file can be garbage collected

#28 zhengxwen opened 4 years ago
0
Bug in unload.gdsn()

#27 zhengxwen closed 4 years ago
0
how to share GDS file

#26 yangli-ai closed 5 years ago
3
Update

#25 zhengxwen closed 5 years ago
0
STEAM: Error: is.character(gds.fn) is not TRUE

#24 complexgenome closed 5 years ago
1
Question: creating and accessing attributes to gds object

#23 complexgenome closed 5 years ago
2
Error in ls.gdsn(node, include.hidden = all) : Stream read error

#22 thierrygosselin closed 5 years ago
5
error if there is no level in a factor variable

#21 zhengxwen closed 5 years ago
0
LZ4_RA.max does not work

#20 zhengxwen closed 5 years ago
0
the node name should not contain "/"

#19 zhengxwen closed 6 years ago
0
adding metadata

#18 splaisan opened 6 years ago
2
cannot create gds file on an opened file.

#17 liqg closed 7 years ago
4
Issue/bsd compatibility

#16 nathanweeks closed 7 years ago
1
caught segfault when recompressing zero-length data

#15 zhengxwen opened 8 years ago
0
lzma compression

#14 zhengxwen closed 8 years ago
0
uncompressing node results in loss of data

#13 smgogarten closed 9 years ago
3
the additional arguments (e.g., offset, scale) in `add.gdsn()` have no effect when `val=NULL`

#12 zhengxwen closed 9 years ago
0
R crashes if print() is called on a previously deleted node

#11 tdeenes closed 9 years ago
1
assign.gdsn does not work in gdsfmt_1.5.4

#10 zhengxwen closed 9 years ago
0
append data to the variable in a compressed manner (has to decompress data first)

#9 zhengxwen closed 9 years ago
0
'val' and 'valdim' are both missing in 'add.gdsn' when a compression method is used

#8 zhengxwen closed 9 years ago
0
"Stream read error" occurs when storage="character" (variable-length string)

#7 zhengxwen closed 9 years ago
0
Stream read error bug

#6 Claudia-CC closed 9 years ago
4
Transpose an array by permuting its dimensions

#5 zhengxwen closed 9 years ago
0
Combine 'apply.gdsn' and 'append.gdsn'?

#4 zhengxwen closed 9 years ago
1
R crashes when creating a gds in forked process

#3 kforner closed 9 years ago
6
Bug in gdsfmtv1.1.1

#2 mewinsto closed 10 years ago
4
A bug in add.gdsn (gdsfmt_1.1.0)

#1 zhengxwen closed 10 years ago
1