Open msahraeian opened 8 years ago
Hi Mohammad,
The strand in the SNV list file means the strand of the gene.
Best, Qing
2016-04-01 11:54 GMT-07:00 msahraeian notifications@github.com:
Hi Qing,
I was wondering how you define the "strand" in the SNV file. I run the GATK pipeline for RNA-Seq, and extract the SNV locations, and the dbsnp membership flags. but it is not clear how you define other columns in SNV file especially the "strand". I would appreciate if you could help on this.
Best, Mohammad
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Hi Qing,
I was wondering how you define the "strand" in the SNV file. I run the GATK pipeline for RNA-Seq, and extract the SNV locations, and the dbsnp membership flags. but it is not clear how you define other columns in SNV file especially the "strand". I would appreciate if you could help on this.
Best, Mohammad