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zhqingit / giremi

GIREMI is a method that can identify RNA editing sites using one RNA-seq data set without requiring genome sequence data.
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Prepare SNV list #33

Closed dfv closed 7 years ago

dfv commented 7 years ago

Hello Qing,

Is it possible to know how to prepare SNV list from VCF file obtained after GATK.

From where I can give information about gene and strand ?

Thanks