search

zhqingit / giremi

GIREMI is a method that can identify RNA editing sites using one RNA-seq data set without requiring genome sequence data.
42 stars 15 forks source link

a problem about mark_snp.py #44

Open ajkshdkjahdka opened 6 years ago

ajkshdkjahdka commented 6 years ago

Hi qing， when i used the commend : $ mark_snp.py -g '/home/liu/11/giremi-master/ref_gene.txt', but i got the problem like that: Traceback (most recent call last): File "/home/liu/111/giremi-master/mark_snp.py", line 87, in main(sys.argv[1:]) NameError: name 'sys' is not defined i have tried many times but nothing i can do, the python version i used was python2.12 , could you please tell what i could do to deal with this problem? appreciated

zambofd commented 6 years ago

hi ajkshdkjahdka, I encountered the same problem.you can try to add the following line before def main(argv): import sys, getopt, re Good luck for u