search

zqfang / GSEApy

Gene Set Enrichment Analysis in Python
http://gseapy.rtfd.io/
BSD 3-Clause "New" or "Revised" License
562 stars 117 forks source link

Suggestion of new features #99

Open loganylchen opened 4 years ago

loganylchen commented 4 years ago

Hi there,

I used your package to review some publication work. It is really a fantastic work. May I suggest some new features about the plotting part.

The genes in the heatmap for each gene set could be set to be clustered and samples could clustered as the .cls phenotypes.

Best wishes

zqfang commented 4 years ago

Thanks, go ahead for your ideas! You could alway get a much pretty heatmap using seaborn.clustermap or seaborn.heatmap. That's why I only implement a basic heatmap here