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zyndagj
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BSMAPz
Updated and optimized fork of BSMAP
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methratio.py ERROR in conda and multicores of CPU: list index out of range
#47
rainoffallingstar
opened
9 months ago
0
How to calculate sequencing depth
#46
bigfacebig
opened
1 year ago
1
methratio.py memory issue
#45
Nitin123-4
opened
1 year ago
0
"AssertionError: String length does not match CIGAR" when running methratio.py
#44
grasscarp
opened
1 year ago
0
Methratio.py does not handle files
#43
Akshaygala
closed
2 years ago
4
methratio.py AssertionError
#42
animaltracks7
opened
2 years ago
3
When I run the script I get the error CMD: R --vanilla
#41
sundongfang
opened
2 years ago
1
"Illegal instruction" message when I launch bsmapz
#40
francescasci91
opened
2 years ago
0
methdiff.py error
#39
Albacc15
opened
2 years ago
1
OverflowError in methratio.py
#38
NaKent
opened
3 years ago
0
methratio.py and Identification of methylated cytosine sites
#37
gill0110
opened
3 years ago
0
Segmentation fault - core dumped
#36
geethavenk
opened
3 years ago
0
ZeroDivisionError
#35
NaKent
closed
3 years ago
4
Significantly different in number of covered cytosines between bsmap 2.90 and BSMAPz
#34
PengNi
closed
3 years ago
4
ZeroDivisionError: float division by zero
#33
praxsubba
closed
3 years ago
1
methratio.py error
#32
Pashu912
closed
3 years ago
0
Float point error in methratio.py
#31
tuhina3184
opened
3 years ago
4
Updated CT SNP to correctly handle no-action
#30
zyndagj
closed
4 years ago
1
query regarding methylation level from methylratio output file.
#29
CS791
closed
4 years ago
1
methratio exception
#28
eitanmarcus
opened
4 years ago
8
Segmentation Fault when Loading Reference
#27
madeluis
closed
4 years ago
3
Hotfix/refcache fix
#26
zyndagj
closed
4 years ago
0
Should fix refcache issues
#25
zyndagj
closed
4 years ago
0
Hotfix/refcache fix
#24
zyndagj
closed
4 years ago
0
Hotfix/refcache fix
#23
zyndagj
closed
4 years ago
0
methratio.py OverflowError
#22
rmvpaeme
closed
4 years ago
5
Feature/py3
#21
zyndagj
opened
4 years ago
0
SAM2BAM conversion not sucessful
#20
CS791
closed
4 years ago
1
buffer overflow detected***
#19
CS791
opened
4 years ago
8
bsmapz -h returns exit-code 1
#18
Darkless012
opened
4 years ago
0
Requirements in README doesn't mention zlib.
#17
Darkless012
closed
4 years ago
0
methratio.py still cannot work on python3
#16
lemonskiller
opened
4 years ago
2
methratio.py 'S not a valid CIGAR character'
#15
mdraminski
opened
4 years ago
5
installation problem
#14
bigpocho
closed
4 years ago
3
Fix/methdiff ratio (#12)
#13
zyndagj
closed
4 years ago
0
Fix/methdiff ratio
#12
zyndagj
closed
4 years ago
0
Differences to original 2.90?
#11
sklages
closed
5 years ago
1
methratio.py -t end repair option does not work
#10
tAndreani
opened
5 years ago
3
Merging for 1.1 release
#9
zyndagj
closed
5 years ago
0
Overlapping reads leads to different results with bsp and bam/sam inputs
#8
zyndagj
closed
5 years ago
1
methratio.py: samtools view: invalid option -- 'X'
#7
SarkaS
closed
5 years ago
4
Pull in changes for v1.0
#6
zyndagj
closed
5 years ago
0
bsmap bigwig format
#5
dorothyzh
closed
6 years ago
2
Questions about the bam output
#4
dingailuma
closed
6 years ago
2
methdiff.py error
#3
Yoshihiro-handa
closed
4 years ago
15
pair orientation
#2
lpantano
closed
8 years ago
4
issue with methylratio.py
#1
lpantano
closed
8 years ago
2