issues
search
4dn-dcic
/
pairix
1D/2D indexing and querying on bgzipped text file with a pair of genomic coordinates
MIT License
83
stars
13
forks
source link
issues
Newest
Newest
Most commented
Recently updated
Oldest
Least commented
Least recently updated
Isoc99
#77
SooLee
closed
5 months ago
2
Is there a tool to convert bam file to juicer's merged_nodups.txt file?
#75
xiekunwhy
opened
9 months ago
0
Cannot install on Mac M2
#74
evo-eco-gen
opened
1 year ago
3
[ti_index_core] the indexes overlap or are out of bounds
#73
molecule53
opened
1 year ago
7
Problem with fragment_4dnpairs.pl
#72
zzh24zzh
closed
2 years ago
0
Avoid a Python 3.10 regression in iterating GzipFiles
#71
stefanor
opened
2 years ago
0
Which coordinates does pairix return?
#70
gdolsten
opened
2 years ago
3
pypairix to capture pairs that have specific readIDs
#69
LIZW2019
opened
2 years ago
0
Fix typo
#68
nathancfox
closed
3 years ago
1
Converting pairs to merged_nodups
#67
papelypluma
closed
3 years ago
2
max chrom size too small
#66
dmalzl
opened
3 years ago
8
free BGZF
#65
lldelisle
opened
3 years ago
0
Support for python3.8
#64
lldelisle
closed
3 years ago
4
Strand fields in pairs file format
#63
oriolfornes
closed
4 years ago
1
Dev 1
#62
SooLee
opened
4 years ago
0
pypairix linecount no longer reverting to int
#61
SooLee
closed
5 years ago
1
Is there a binary spec for the pairix format?
#60
cmdcolin
closed
4 years ago
7
Fetching small regions can be very slow
#59
mimakaev
closed
4 years ago
4
Integer overflow for -n option: reporting negative numbers!
#58
mimakaev
closed
5 years ago
6
0.3.6
#57
SooLee
closed
6 years ago
0
Two questions about the pairs format
#56
lh3
closed
6 years ago
2
0.3.5
#55
SooLee
closed
6 years ago
0
29
#54
SooLee
closed
6 years ago
0
Add a Codacy badge to README.md
#53
codacy-badger
closed
6 years ago
0
0.3.3
#52
carlvitzthum
closed
6 years ago
0
executing get_blocknames() twices crashes Python
#51
golobor
closed
6 years ago
3
pypairix check triangle
#50
SooLee
closed
6 years ago
0
updated valgrind test for travis
#49
SooLee
closed
6 years ago
0
0.3.1
#48
carlvitzthum
closed
6 years ago
0
0.3.0
#47
SooLee
closed
6 years ago
0
0.2.9
#46
SooLee
closed
6 years ago
0
fix extra spaces from some versions of wc
#45
burakalver
closed
6 years ago
0
Hotfix
#44
carlvitzthum
closed
6 years ago
0
autoflip, print-region-split-character, added run-merge-pairs
#43
SooLee
closed
6 years ago
0
V0.2.6
#42
SooLee
closed
6 years ago
0
assume symmetrical query
#41
blajoie
closed
6 years ago
1
quick proofread of README.md
#40
scottkall
closed
6 years ago
1
Error indexing a custom contact text file
#39
RXCoux
closed
6 years ago
2
0.2.5
#38
SooLee
closed
6 years ago
0
V0.2.4
#37
SooLee
closed
6 years ago
0
haha
#36
SooLee
closed
6 years ago
0
V0.2.3
#35
SooLee
closed
6 years ago
0
V0.2.2
#34
SooLee
closed
6 years ago
0
V0.2.1
#33
SooLee
closed
6 years ago
0
V0.2.0
#32
SooLee
closed
6 years ago
0
V0.1.9
#31
SooLee
closed
6 years ago
0
V0.1.8
#30
SooLee
closed
7 years ago
0
V0.1.7
#29
SooLee
closed
7 years ago
0
V0.1.6
#28
SooLee
closed
7 years ago
0
V0.1.5
#27
SooLee
closed
7 years ago
0
Next