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Similar efforts that we should reference and/or be inspired of:
- https://bioconductor.org/packages/release/bioc/html/alabaster.html
- https://bioconductor.org/packages/release/bioc/html/BiocIO.ht…
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Currently there are no stats for bioc packages: https://cranlogs.r-pkg.org/badges/S4vectors
Not sure if this data is available from posit/p3m bioc mirrors. Otherwise the data is available from bioc…
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seems to be in pretty good shape
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We could discuss
- possible new Carpentries lessons
- workshops
- other ideas and suggestions
cc @lgatto, @mblue9, @rcastelo, @lasy, @spholmes, @almeidasilvaf
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```{r}
renv was unable to query available packages from the following repositories:
- # https://bioconductor.org/packages/3.18/bioc/bin/windows/contrib/4.4 --------
error downloading 'https://bioco…
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As discussed earlier, I run into a problem where the resolver hangs if there are too many `repos`.
```r
> pak::pkg_install('ATACseqQC', dependencies=TRUE)
✔ Updated metadata database: 5.50 MB …
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Just wanted to give you a heads up, the devel version of `rtracklayer` is failing on Bioc:
http://bioconductor.org/checkResults/devel/bioc-LATEST/rtracklayer/
Thanks!,
Brian
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- Equivalent to `tools::CRAN_package_db` for Bioc?
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Hi Jeroen @jeroen
Thank you for the introduction to the r-universe and for your efforts in including the Bioconductor universe.
Question: Is it possible to configure the path where packages ar…
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@shbrief
The package is in an error state on Bioconductor devel:
https://bioconductor.org/packages/devel/bioc/html/AnVILWorkflow.html
Can you push updates to the Bioconductor `devel` branch?
…