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This is needed to support chromogenic assays.
See https://scikit-image.org/docs/dev/auto_examples/color_exposure/plot_ihc_color_separation.html
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### Description:
The issue I am opening relates to the discussion in "Enhance gallery example on colour separation of stained tissues" #6333
I am working on tissue slides stained with H&E and I wou…
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when I run find_stain_index like the example code:
w_est = htk.preprocessing.color_deconvolution.rgb_separate_stains_macenko_pca(imInput, I_0)
Perform color deconvolution
deconv_result = htk.prep…
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There should be a node, which does Stain Separation on Images.
There exists a ImageJ plugin which does Stain Separation on RGB Images with Color Deconvolution. The plugin can't be executed with the i…
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Hello. I've been using the XDGMM code to estimate density distributions in color-color diagrams. It worked well except that it took very long to converge. At some point I heard that Bovy et al. put a …
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The color deconvolution step does not seem to separate red and green staining in my PSR images. I did not get any errors when running the fiber quantification matlab code, but the output parameter she…
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In TD proteomics you often want to have the deconvoluted and original spectrum side by side.
By clicking on the deconvoluted spectrum one often wants to highlight the original peaks in before deconvo…
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I am a new HistoQC user. I would like to ask what the variables: deconv_c0, deconv_c1, deconv_c2 stand for.
I am asking in the relation to the IHC H-DAB staining.
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Hi~
Thanks for your work.
I ran SelfDeblur on my own blur images and get gray results. It seems that the SelfDeblur is performed on Y channel. So can you provide the code coverting the results to RG…
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importing `napari_simpleitk_image_processing` fails with errors about missing GL libraries (see below). I assume this means that this plugin needs a working display?
is there a workaround to make t…
thawn updated
2 years ago