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Hi,
Thanks for your work.
I queried some up and down-regulated genes on sigcom web, there were some results from different data source, and here are two of them:
![image](https://user-images.github…
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### Manufacturer
Yale
### Model
SD-L1000-CH
### Model ID
_No response_
### HW Version
_No response_
### Battery Type
AA
### Battery Quantity
4
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**Is your feature request related to a problem? Please describe.**
No
**Describe the solution you'd like**
Features similar to the desktop version
- Desktop
```
sender name, [9/27/2024 11:00…
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Hello,
I believe there is an issue with the `#define` parsing in the code [here](https://elixir.bootlin.com/linux/v6.11.1/source/include/linux/pm.h#L475). This definition is not being detected when…
Fomys updated
3 weeks ago
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I download the pre-trained model from https://maayanlab.cloud/sigcom-lincs/#/Download
I found L1000_to_RNAseq_pipeline_training.ipynb said the input is Level 3 of L1000.
I used the DeepCE model…
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I'm having troubles downloading the LINCS L1000 perturbation signatures:
```{r}
> l100.genetic.pertsig l100.compounds.pertsig
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### MOA Multi-label Classification Predictions
@gway @shntnu
- A compound profile has multiple MOAs i.e. more than one target label (multi-label classification)
- All MOAs found in just on…
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Hi Daniel,
Just wanted to note that there are still duplicate edges in hetionet in the newest `integrate.ipynb`. Specifically, the following two types of relationships give duplicate edge errors wh…
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### L1000 vs Cell Painting Comparison based on median correlation values from compound replicates per dose
@gwaygenomics @shntnu
- This is a recap of what I presented about 2 weeks ago dur…
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I am pasting @AdeboyeML's analysis performed in https://github.com/broadinstitute/lincs-profiling-comparison/issues/2#issuecomment-729394257 so that we can continue a targeted discussion in a clean gi…