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Here I summarise and expand discussions with @akreshuk and @lorenzocerrone.
In general, the user interface should have sequential layout and minimal options. Here are some details:
### Logic Fix…
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Hello, as an example, the specific function of `multicut_kernighan_lin`, which I learned and tried to run in pycharm. I'd like to see the source code of its specific algorithm (intuition tells me it's…
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implement min-st-cut interface similar to multicut/lifted multucut
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Supporting lifted edges would enable better modeling of long range information across time. Lifted edges only provide a contribution to the cost, but not to the connectivity.
## Motivation
We so…
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First of all, thank you for your efforts to develop nice APIs. To understand lifted multicut, I am now trying to execute two example programs in the Nifty documentation:
‘plot_agglomerative_clusterin…
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Add multi-object tracker (dynamic array of single object trackers):
* SORT-tracker: `cv::KalmanFilter` + Hungarian algorithm https://en.wikipedia.org/wiki/Hungarian_algorithm and https://arxiv.org…
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Hi
Thank you for making this software available.
I would like to use nuclear prediction label map from StarDist for the Lifted MultiCut segmentation as part of the Plantseg workflow.
I had a l…
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Hi! Thank you for this amazing work.
I've segmented the nuclei for some images with another model that I've been training for a while, and wish to use these nuclear segmentations as seeds for memb…
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I tried to use the Nuclei and Lifted Multicut approach and I got an error to 'cannot import name 'lifted_problem_from_probabilities' from 'elf.segmentation.features''
So, the solution is basically …
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Hi all! First, congrats for this amazing and friendly tool.
I have been trying the lifted_multicut protocol as you described in the wiki.
https://github.com/hci-unihd/plant-seg/blob/master/plantse…