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Automatic differentiation would be useful so we don't have to implement linearizations or Jacobians of complicated analytic functions. Examples where autodiff would help:
- Jacobians and Hessians o…
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the linear gradients are currently recorded like the other basis functions. this could be done away with because you technically don't need to do this every single time...
they are simply affine fu…
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I am trying to understand how selscan excludes variants, as a region I am interested in appears to be missing some important variants in my output. My command is:
selscan --ihs --vcf inFile.vcf.gz…
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**Describe the issue**
While there is still a problem with identifying linear features without a precise hit (#5256), a new problem has appeared with this feature. Now objects that are not within the…
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It would be helpful to have an option (named, for instance, `log_color`) that allows using color maps on logarithmic scales, similar to `log_x`, `log_y`, `log_z`. This would essentially rescale the st…
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So, I learned the hard way that INTER_LINEAR does not just do bilinear interpolation in cv::remap, but fixpoints the maps first and then does bilinear interpolation. In the documentation of interpolat…
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## Description
HELP NEEDED!
IVIM model with option '**_VarPro_**' throws error:
- "ValueError: `x0` is infeasible.".
When I set the bounds manually, I get this error:
- "ValueError: Inconsi…
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I think we changed this intentionally at one point to help surfers playing rj and getting owned by their keybind but now that we have (will have) proper safeguards that seems like a better solution.
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How exactly does COMPSRA determine if a read maps to a circRNA? Does it specifically consider only reads that map to the splice junction? Otherwise, reads from linear mRNAs that map to an exonic seque…