-
Or if there's anything nblast-rs is missing, raise an issue! https://crates.io/crates/nblast
-
This is an issue for collecting discussion, small ease of use, and cleanup items for landmarks and neuron similarity given the recent push on these features.
### Major
- [ ] Decouple transform cre…
-
Hi @clbarnes,
@schlegelp and @NikDrummond reminded me about this effort today. This is not really an issue, but I figure the discussion may as well live with the repo. I was curious about where you …
-
If using nblast inside another function when importing but not attaching nat.nblast
from elmr package.
```
get(smat)
2 nat.nblast::nblast(xdp, db, normalised = normalised, .parallel = .parallel,…
-
Could links to VFB viewer be added to the cluster composition table?
http://flybrain.mrc-lmb.cam.ac.uk/si/nblast/clusters/clusters/902/
The top 10 clusters table in nblast on-the-fly links to the c…
mmc46 updated
9 years ago
-
Dear all,
We have found nblast really helpful to our current project, especially when doing nblast against the FlyEM database.
On my laptop (6 cores 12 threads), it takes about 4 min for a one a…
-
Merging two NBLAST results doesn't fit the current paradigm of results table merging.
- Merge on ID won't work - score columns will differ.
- To make results interpretable to users, we'd need a c…
-
- CATMAID version: 2021.12.21-62-gfe0a57ad9
- CATMAID instance: https://neurophyla.mrc-lmb.cam.ac.uk/catmaid/drosophila/l1/seymour/
- Browser: Chrome, Version 98.0.4758.80 (Official Build) (x86_64)
…
-
Just to leave a paper trail for this observation:
I was setting up a large NBLAST on a Linux (Ubuntu 16.04) server and noticed that it was running suspiciously slow. Some digging flagged `pykdtree`…
-
primarily due to reverse scores. But for some reason it seems to me that this can be _much_ worse than using bigmat,
I just had an example with rstudio where it took a minute to do 1 x 3677 normalise…