issues
search
navis-org
/
navis
Python library for analysis of neuroanatomical data.
https://navis.readthedocs.io
GNU General Public License v3.0
80
stars
28
forks
source link
issues
Newest
Newest
Most commented
Recently updated
Oldest
Least commented
Least recently updated
Switch documentation to mkdocs + mkdocs material
#147
schlegelp
opened
1 month ago
1
caveclient > 5.15.2 crashes microns tutorial
#146
jakobtroidl
opened
1 month ago
1
disallow Dotprops for `write_swc`
#145
schlegelp
closed
3 months ago
2
Remove conditional igraph tests
#142
clbarnes
opened
3 months ago
0
Remove no-igraph tests
#141
clbarnes
closed
3 months ago
0
Test against python 3.12
#140
clbarnes
opened
4 months ago
1
igraph usage
#139
clbarnes
opened
4 months ago
2
Switch to pygfx?
#138
schlegelp
opened
4 months ago
1
Neurons from Navis neuPrint tutorial load but without connection tables (no n_connectors)
#135
Neurophila
opened
5 months ago
3
Parquet skeletons
#134
clbarnes
opened
6 months ago
4
NeuronConnector (clean git history)
#133
clbarnes
closed
6 months ago
0
Proposal: delay graph generation for skeletons
#132
schlegelp
closed
1 month ago
1
Fix pandas version to <2
#131
clbarnes
closed
6 months ago
2
New Feature for xform_brain: on-the-fly shortcuts for multi-transform chains
#130
schlegelp
opened
6 months ago
0
CI: Update python versions
#129
clbarnes
closed
4 months ago
3
requirements: use pandas >= 2
#128
clbarnes
opened
6 months ago
4
NML export
#126
perlman
opened
6 months ago
0
Skip plotting empty TreeNeuron in plotly
#125
floesche
closed
7 months ago
1
neuprint: Two fixes
#124
stuarteberg
closed
7 months ago
5
split_axon_dendrite fails for big neurons
#123
katie-marquand
opened
7 months ago
2
downsample_neuron does not reassign connectors
#122
katie-marquand
opened
7 months ago
0
Traversal model make new nodes which is not in edges
#121
LeeJinmook
closed
9 months ago
5
IntEnum for treenode-connector relationships
#120
clbarnes
opened
10 months ago
2
NeuronConnector class for connectivity of TreeNeurons
#119
clbarnes
closed
6 months ago
5
Avoid potential divide by zero error
#118
Robbie1977
closed
1 year ago
1
models: fix Bayesian traversal model and test
#117
aschampion
closed
1 year ago
2
build(deps): bump setuptools from 57.5.0 to 65.5.1 in /docs
#116
dependabot[bot]
opened
1 year ago
0
New numpy version leads to AttributeError
#115
jakobtroidl
closed
9 months ago
5
fix #113
#114
pnewstein
closed
1 year ago
1
Custom colored connectors in plot2d is broken
#113
pnewstein
closed
1 year ago
0
Set DYLD_LIBRARY_PATH for elastix on MacOS
#112
jasper-tms
closed
1 year ago
2
Hackathon: dask backend
#111
aschampion
opened
1 year ago
1
SWC io: DFS-sort nodes, optionally do not reindex
#110
clbarnes
opened
1 year ago
5
Add tags=None to TreeNeurons
#109
clbarnes
closed
1 year ago
1
Thoughts on synblast
#108
clbarnes
opened
1 year ago
1
Test against python 3.10
#107
clbarnes
closed
1 year ago
1
Use conventional logger names when NAVIS_SKIP_LOG_SETUP
#106
clbarnes
closed
1 year ago
1
Minor: documentation on navis.Volume
#105
mwinding
opened
1 year ago
1
Fix in network traversal models
#104
dokato
closed
1 year ago
1
Miscellaneous hackathon fixes
#103
aschampion
closed
1 year ago
2
cut_skeleton memory issues
#102
dadanhan
closed
1 year ago
2
improve scoring function generation with large sets of neurons
#101
schlegelp
closed
1 year ago
0
Fix tests
#100
schlegelp
closed
1 year ago
0
Update r.py
#99
azatian
closed
1 year ago
1
NBLAST v1 added from Kohl et al 13
#98
dokato
closed
1 year ago
2
Make nbl.smat.LookupNdBuilder more generic
#97
clbarnes
opened
1 year ago
2
Fix bug in plotting/plotly/graph_objs.py
#96
antortjim
closed
1 year ago
1
New system for ultrastructural features
#95
schlegelp
opened
1 year ago
0
Make function signatures more consistent
#94
schlegelp
opened
2 years ago
0
Bug changing connector size in navis.2d_plot()
#93
mwinding
closed
2 years ago
2
Next