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navis-org
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navis
Python library for analysis of neuroanatomical data.
https://navis-org.github.io/navis/
GNU General Public License v3.0
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Masking
#172
schlegelp
opened
1 month ago
2
Various fixes + improvements for H01 and MICrONS
#171
schlegelp
closed
1 month ago
0
add edges to MeshNeuron
#170
fcollman
opened
1 month ago
6
Integrate merge log to repair mesh topology with breaks
#169
fcollman
opened
1 month ago
1
Process=false option
#168
fcollman
closed
1 month ago
2
allow me not to remove duplicate vertices from cloudvolume navis
#167
fcollman
closed
1 month ago
3
Various improvements
#166
schlegelp
closed
1 month ago
0
NeuroPython workshop
#165
schlegelp
closed
2 months ago
0
read_tiff does not work for both non-imagej tiffs and greyscale tiffs
#164
BenCaiello
opened
2 months ago
12
Read files from FTP server
#163
schlegelp
closed
2 months ago
0
H01 interface
#162
jinhan
closed
1 month ago
5
Compute geodesic distance between node a set of node pairs efficiently
#161
jakobtroidl
closed
2 months ago
11
CAJAL interface
#160
schlegelp
opened
2 months ago
1
H01 interface
#159
jinhan
closed
2 months ago
1
Swap docs to MkDocs
#158
schlegelp
closed
2 months ago
6
Improve plotting
#157
schlegelp
closed
2 months ago
1
Improve subset neurons
#155
schlegelp
closed
3 months ago
0
Issue with memory de-allocation
#154
schlegelp
opened
3 months ago
1
Version 2 Roadmap
#153
schlegelp
closed
3 months ago
7
navis.mesh() multiprocessing error
#152
lankiszhang
closed
3 months ago
3
Feature request: support NWB format
#151
schlegelp
closed
1 month ago
2
Integrate fastcore functions
#150
schlegelp
closed
3 months ago
1
docs(README): precomputed link neuroglancer repo
#149
guspan-tanadi
closed
4 months ago
1
fixes for neuromorpho interface
#148
jakobtroidl
opened
6 months ago
3
Switch documentation to mkdocs + mkdocs material
#147
schlegelp
opened
7 months ago
7
caveclient > 5.15.2 crashes microns tutorial
#146
jakobtroidl
opened
8 months ago
10
disallow Dotprops for `write_swc`
#145
schlegelp
closed
9 months ago
2
Remove conditional igraph tests
#142
clbarnes
opened
10 months ago
0
Remove no-igraph tests
#141
clbarnes
closed
10 months ago
0
Test against python 3.12
#140
clbarnes
opened
10 months ago
1
igraph usage
#139
clbarnes
opened
10 months ago
2
Switch to pygfx?
#138
schlegelp
opened
11 months ago
1
Neurons from Navis neuPrint tutorial load but without connection tables (no n_connectors)
#135
Neurophila
opened
11 months ago
3
Parquet skeletons
#134
clbarnes
opened
1 year ago
4
NeuronConnector (clean git history)
#133
clbarnes
closed
1 year ago
0
Proposal: delay graph generation for skeletons
#132
schlegelp
closed
7 months ago
1
Fix pandas version to <2
#131
clbarnes
closed
1 year ago
2
New Feature for xform_brain: on-the-fly shortcuts for multi-transform chains
#130
schlegelp
opened
1 year ago
0
CI: Update python versions
#129
clbarnes
closed
10 months ago
3
requirements: use pandas >= 2
#128
clbarnes
opened
1 year ago
4
NML export
#126
perlman
opened
1 year ago
1
Skip plotting empty TreeNeuron in plotly
#125
floesche
closed
1 year ago
1
neuprint: Two fixes
#124
stuarteberg
closed
1 year ago
5
split_axon_dendrite fails for big neurons
#123
katie-marquand
opened
1 year ago
2
downsample_neuron does not reassign connectors
#122
katie-marquand
opened
1 year ago
0
Traversal model make new nodes which is not in edges
#121
LeeJinmook-SKKU
closed
1 year ago
5
IntEnum for treenode-connector relationships
#120
clbarnes
opened
1 year ago
2
NeuronConnector class for connectivity of TreeNeurons
#119
clbarnes
closed
1 year ago
5
Avoid potential divide by zero error
#118
Robbie1977
closed
1 year ago
1
models: fix Bayesian traversal model and test
#117
aschampion
closed
1 year ago
2
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