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Hello.
Thanks for this awesome work!
I am trying to generate rotamer libraries of additional non-standard amino acids using the method described in the MEDFORD paper, except I am using gaussian …
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Hi,
I'm currently running STEM simulations using abTEM and I'm wondering if it's possible to generate a side-view visualization of the beam intensity depth profile for a specific probe location.
…
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Hi @YichengLin-lab,
While I am studying your research team's paper and trying to run code with the following command:
**python main.py --peptide VMMGLLMFS --HLA HLA-A*26:01 --num_simulations 10** …
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![image](https://github.com/user-attachments/assets/72c150c0-eb3e-42bf-b44d-60416d912205)
I have some questions~ 1. Can you explain ABase, ALast, and Aavg specifically for the experimental results? W…
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Should we write a separate vignette for documenting the differences in the "Connolly" bootstraping for species and individuals and the parameters of the rsad / rrad functions?
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Hello! Thanks for another great contribution.
While reading the NeuralGCM documentation (https://neuralgcm.readthedocs.io/en/latest/), I wasn't able to find instructions on reproducing the decadal…
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@simonsobs/mbs @jodunkley
Plan is to have a short summary by end of this week, so we can submit to publication committee, I'll post updates here.
Data release:
* The main product is [**`2019…
zonca updated
3 years ago
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Dear i-pi developers,
I am new to the i-pi code and I recently tested the NPT pimd simulations of organic liquids with i-pi, it runs very well! Thank you for your great and easy-to-use package!
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White paper from IBM Quantum and co-authors on HEP: https://arxiv.org/abs/2307.03236 This might contain some interesting open problems.
### Action items
- [ ] Read through paper and identify any inte…
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Hi,
Great paper and package. Thanks alot for making the code open source. I am trying to simulate the dataset for benchmarking cell-cell interaction tools following the Figure 1 f,g,h of the paper.…