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Good morning. I was doing a multi domain analysis and I was trying to understand how to analyze the PCA depending on parameters using studio.
I am not sure to completely understand the "alignment r…
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### Is this a unique feature?
- [X] I have checked "open" AND "closed" issues and this is not a duplicate
### Is your feature request related to a problem/unavailable functionality? Please describe.…
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# Grading Assessment for Yixuan Huang
## R Script Components
### 1. Data Loading and DESeq2 Object (1 point)
Score: 1/1
### 2. VST and PCA Implementation (1 point)
Score: 1/1
### 3. PCA …
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Hi, I've been trying to run the second part (SEVtras.ESAI_calculator) of the tool, but I am getting the error below.
```
/home/kleinman/seol.song/projects/kleinman/seol.song/from_hydra/SEVtras/ven…
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# Grading Assessment for Daniel Mendoza-Sanchez
## R Script Components
### 1. Data Loading and DESeq2 Object (1 point)
Score: 1/1
### 2. VST and PCA Implementation (1 point)
Score: 1/1
#…
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### Problem
In `main`, 4 figures and .json/.csv are generated below:
```python
fig1 = nmf.component_plot(df_components, args1.xrd, args1.x_units, args1.show)
fig2 = nmf.component_rati…
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Hi Jiabo,
I ran GAPIT, and it ran perfectly well until yesterday. But today, I got this error message while performing GWAS analysis using GAPIT as below;
Error in GAPIT.Genotype(G = G, GD = GD,…
Beawo updated
2 weeks ago
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Once @brieuclehmann comes back to me with fast code for PCA analysis using tskit and np.linalg.eig, I should put together a PCA page. This issue is just to remind me to do so (and follow up with Brieu…
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library(irGSEA)
library(Seurat)
Loading required package: SeuratObject
Loading required package: sp
‘SeuratObject’ was built under R 4.3.0 but the current version is 4.4.0;
it is recomended that …
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dear Yuzhou Feng
my short question
how to import CSV file of halo and how to just run this variant for PCA analysis?
firstly installing your code made error could you check?