-
Živjo,
Ko delaš Binder povezavo moraš izbrati URL in ne FILE:
![image](https://github.com/user-attachments/assets/f73ad0e0-0f0d-449d-bf50-d539a1c2ad54)
Ko sem to naredil se je sicer pojavil dru…
-
Za oddajo projekta je dobro narediti issue, zato sem ga naredil kar jaz.
Nahitro sem pogledal kodo zakaj vama ne deluje v binderju in je prvi razlog to, da se na postgres povezujeta z privzetim por…
-
Za oddajo projekta bi bilo treba odpret issue, zato sem ga jaz namesto vaju :)
Projekt sem pognal lokalno (glede na naš pogovor preko emaila ima binder neke težave).
Sama aplikacija je narejena z…
-
Due to non-US local and "0,0" like string parsing.
Example file:
```
"",Galaxy5-[MACS2_BB].bed,Galaxy7-[MACS2_CC].bed,Galaxy16-[SICER_BB].interval,Galaxy23-[SICER_CC].interval
Galaxy5-[MACS2_BB].b…
-
Current implementation of ChIP-seq pipeline launches `sicer.sh` and filters its output through the pattern `['*sicer.log', '*.bed', '*rip.csv']`. However, `sicer.sh` used to have its own file filterin…
-
At the moment files are not cleaned up till all the files are processed, which leads to huge size of resulting folders.
Extra files:
* Input pileup_bed are duplicated
* extra copies of -remove-1 BE…
olegs updated
5 years ago
-
Pozdravljeni,
zanimata me dve stvari in sicer:
1. zanima me kako bi v tabeli pomnožil le eno vrstico z nekim številom. In sicer bi recimo v tabeli t9 (vizualizacija_moja.r) pomnožil vrstico s prvim…
-
The list of builds is outdated. At a minimum add the latest builds from the same organisms already included: mm10, hg38, dm6, sacCer3, rn5, rn6.
The "pombe" and "tair8" are not dbkeys in current Gal…
-
Hi! Thanks for all of your work building SICER. It's our peak caller of choice, especially for broad domains!
I occasionally run into an error in the step: "Determining the score threshold from rando…
-
Projekt sem dokončala, zanima me, če bi svetovali še kakšne popravke. Sicer pa je projekt pripravljen za oddajo.