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### Description
I'm submitting multi-process jobs on slurm. The job script is
```
#!/bin/bash
#SBATCH -p gpu
#SBATCH --nodes=1
#SBATCH --ntasks-per-node=2
#SBATCH --gpus-per-task=1
#SBATCH --t…
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On slurm systems, it will sometimes happen that a node is taken out of the slurm pool and turned into an interactive node, this seems to happen with some regularity on Fox. The admins are unlikely to…
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**Snakemake version**
8.16
**Describe the bug**
There are many cluster environments where you are not allowed to run snakemake from login nodes, and you have run snakemake in a SLURM …
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This happens on rocky linux 9, shared temp dirs are not created with
```
srun --use-shared-tmpdir --pty bash
```
```
cmake -DCMAKE_BUILD_TYPE=Release \
-DAUTO_TMPDIR_ENABLE_SHARED_TMPDIR…
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Hello,
I am encountering an issue with MPI+OpenMP job allocation using Slurm and OpenMPI. The nodes in my setup each have two Intel Sapphire Rapids CPUs, with 56 physical cores per CPU, totaling 1…
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**Is your feature request related to a problem? Please describe.**
Hello. I am a developer of Bitextor (https://github.com/bitextor/bitextor), which is based on Snakemake, and we are having issues ru…
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**Is your feature request related to a problem? Please describe.**
The script I wrote (`derotation_slurm_job`) could be improved by using [submitit](https://github.com/facebookincubator/submitit) to …
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**Software Versions**
Snakemake 8.16.0
snakemake-executor-plugin-slurm 0.9.0
slurm 23.11.7
**Describe the bug**
I have recently moved to Snakemake v8.16 and have been trying to execute…
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**Snakemake version**
8.16
**Describe the bug**
If I define `groups` and `group-components` in a profile yaml file they are ignored when using the SLURM executor. If I instead define …
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**Is your feature request related to a problem? Please describe.**
Our current Slurm scripts are a combination of 2 bash scripts that might be difficult to understand and customize in other user envi…