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Specifically, Shapefiles, GeoPackage and GeoJSON as they are popular formats in data portals.
Shapefile has an embedded DBase (yikes!) db and is a proprietary format from Esri. Use https://github.c…
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Hi everyone,
I’m attempting to perform spatial calibration with the PLUS Toolkit, but I keep running into issues, and I’m not entirely sure why.
Initially, I suspected that the problem was due t…
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# General Notes
This repository serves as a mostly automa…
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Similarly to [shapely.STRTree](https://shapely.readthedocs.io/en/2.0.6/strtree.html#strtree), it would be nice if we could provide a way in spherely to create a spatial index of a (large) collection o…
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Hello, thank you for developing this great and easy to use tool. Have you got any recommendations on using it for non sequencing-based transcriptomic methods e.g. 10X Visium? What are the implications…
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Hi @roramirezf ! thanks for providing the reproducibility code for your paper!
I would like to use the cell2location deconvoluted cell types expression from the spatial data.
(https://github.com/s…
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Hi, thank you for this amazing work.
May I ask, do you have shapefiles or documentation about the spatial regions used? The "FIGURES" folder mentioned in the README is not present in the git repo n…
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### Search before asking
- [X] I have searched the Ultralytics YOLO [issues](https://github.com/ultralytics/ultralytics/issues) and found no similar bug report.
### Ultralytics YOLO Component
_No …
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Hello,
First of all, congratulations on what looks to be a very cool tool!
I was wondering if it was possible to run the tool on imaging based spatial data such as cosmx? From the preprint it se…