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I'm looking over the revised manuscript. The new tree figure is a great improvement and is much easier to follow, particularly alongside the new description of the Algorithm and Concepts in the docume…
ms609 updated
1 month ago
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Simple, self-use only: folders
Advanced, possibly public: Use a visual AI model fine-tuned on fish to extract low-dimensional feature vectors which are then clustered using _insert clustering algor…
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How can we incorporate speciation events? See Shtilerman et al, 2015.
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We should look into doing analysis with the chemical speciation networks such as CSN and IMPROVE as well as others. MONET can already read this data from the AQS pre-generated data but it may be usef…
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Hi,
I am inferring diversification rates under an episodic birth-death model with empirical taxon sampling and environment-correlated speciation & extinction rates. My Rev script for doing this wo…
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* Tests of special cases (of fossilised birth-death, birth-death-sampling etc)
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**Describe the bug**
Rows with fraction and speciation that need to be converted FROM some text TO NA are not flagged as HARMONIZED in the TADA.Harmonized.Flag column.
In TADA_HarmonizeSynonyms,…
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jirikadlec2[CodePlex] The information returned by the USGS NWISIID web service is incomplete. WaterML 1.1 specification includes a quotSpeciationquot element. In the NWISIID system there are two varia…
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```
2) The "Speciation: Birth-death serially sampled model", the ideal
parameterization would be (instead of bdss.birthRate, bdss.relativeDeathRate,
bdss.psi):
bdss.birthRate (=lambda keep as it is)…
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```
2) The "Speciation: Birth-death serially sampled model", the ideal
parameterization would be (instead of bdss.birthRate, bdss.relativeDeathRate,
bdss.psi):
bdss.birthRate (=lambda keep as it is)…