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Hello! At some point, we worked with @mareikegrotheer and @bloomdt-uw to implement a pipeline for tractography in neonates/infants (see [this repo](https://github.com/bloomdt-uw/babyafq)), oriented sp…
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Hello everyone,
as for my understanding, PySurfer does not have a way to plot dwi track fttb. Are you planning to implement them in the near future? If yes, I would like to contribute it if you wa…
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It would be terrific to start a conversation about an agreed-upon data format for tractography.
@arokem @Garyfallidis
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Hi! Thanks for your nice work.
I would like to ask whether it's OK not to have the diffusion MRI and the connectivity map. If I'm only interested in the E field distribution and I only have the str…
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## Use case
We are looking to visualize tractography-generated streamlines from a Track File (.trk) in Neuroglancer. See [Track File docs](https://trackvis.org/docs/?subsect=fileformat) and an [ex…
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- DICOM contains more information than we currently support, which must not be lost
- Currently this information is in MRML (visualization) and vtkPolyData (data).
- Should visualization information c…
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Hello,
I am trying to run SDC through the web interface. Upon execution I am getting this error:
File "/home/exacloud/gscratch/IGNLab/qsiprep_test/DTIvenv/dtiplayg/lib/python3.11/site-packages/…
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### Title
### Fast Tractography Streamline Search.
- Hierarchical search using a space partitioning tree (binary search tree / KD-tree ).
- Using an adapted distance measure (Entry-wise matrix …
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Dear experts, is it possible to provide tractography with a list of locations (X, Y, Z) for the seeds?. I can imagine that this file would be similar to the `output_seeds` in https://github.com/MRtri…
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Hi @zhangfanmark I am getting the following error when running wm_quality_control_tractography. It goes through a few subjects in a loop and then gives the `Segmentation fault (core dumped)` error
…