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**Question:**
What is the appropriate Biolink Model slot for a URL associated with a node?
MolePro encountered a data item called "reaction_url" (e.g., https://reactome.org/PathwayBrowser/#/R-MMU-…
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https://bioregistry.io/registry/coconut
CS76 updated
2 months ago
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For all terms in https://docs.google.com/spreadsheets/d/13NJsDH0fBZEFYuGZYkJ2QUah9WV9731zliiW-9uOTuA/edit#gid=2059655613
xrefs → CL for all reviewed definitions
Bioregistry needs a cell Guide ent…
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CC0 is not a recommended license for software like biolink and linkML and limits adoption and usage.
From: https://creativecommons.org/faq/#can-i-apply-a-creative-commons-license-to-software
_We…
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Several ontologies contains annotations that have not been manually curated/edited, but are instead the result of some kind of automatic generation process.
For example, FlyBase’s _Drosophila_ anat…
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[pydantic docs](https://docs.pydantic.dev/2.8/concepts/validators/#field-validators) read:
> @field_validators are "class methods", so the first argument value they receive is the UserModel class,…
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It would be super cool if we could build our own contexts and validate them against bioregistry as part of our CI. I think this would significantly encourage standardisation. I would use this for all …
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### Prefix
up
### Name
UniProt core
### Homepage
https://sparql.uniprot.org/
### Source Code Repository
_No response_
### Description
This IRI prefix `http://purl.uniprot.or…
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### Redundant Prefix
glygen
### Target Prefix
glytoucan
### Explanation
The local unique identifier in the GlyGen prefix is actually a GlyTouCan ID, as we use these IDs to identify Glycans in Gly…
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@cthoyt wrote this script to check overlap with existing OBO ontologies; I think we should fold this into our NOR SOP asap.
> I wrote [a script](https://gist.github.com/cthoyt/d26df3ec12f6a15f31…