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For example, the RVIS measure from Petrovski et al [1] assesses a gene's intolerance to genetic variation based on the ESP project. I also recall a poster from Mark Daly's lab at Biology of Genomes t…
arq5x updated
11 years ago
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At this moment I do not have clear yet what the data model is going to be. These things come to mind at this moment:
- died identifier
- when the identifier died
- type of identifier: dead, zombi…
egonw updated
2 years ago
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When using the `getPropeties()` method to obtain provenance information about a given mapper object only provenance information on one data source is provided. For example, in the case of a 'Homo sapi…
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Together with eNanoMapper partners (https://github.com/enanomapper) and @andrawaag , started writing something up:
```
http://specs.enanomapper.net/altmetrics/
```
I think it would be great of Open …
egonw updated
10 years ago
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To whom it may concern,
When running the statistics function over Wikipathways downloaded pathways, it throws the following error
![pastedImage](https://user-images.githubusercontent.com/8264077…
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I want collect ideas for a tool which automatically adds more meta data.
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1. In LINKSET_EXACT_WIKIPATHWAYS20170929.ttl are URIs like an actual pattern from wikipathways? If so then need to add it to BridgeDb.
2. LINKSET_CLOSE_PARENT_CHILD_ISOTOPE_INSENSITIVE_PARENT_WIK…
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Regarding the documentation below:
- [ ] How can people register new data sources, from within PV? (I actually don't think we would want that...)
- [x] "is given priority"; how? For the dropdown men…
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In the Typescript branch, there is the use of the word Kaavio in various places. Am I wrong in thinking that this project is separate from Kaavio and would, in fact, be used in PVJS? See [this file na…
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In [datasources.txt](https://github.com/bridgedb/BridgeDb/blob/master/org.bridgedb.bio/resources/org/bridgedb/bio/datasources.txt), Gramene Genes should have the Miriam identifier `urn:miriam:gramene.…