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AmiGO seems to be counting differently than the numbers shown on release/current and the GO homepage stats. Looking at EXP, it seems that AmiGO includes High Throughput codes with a count of 998,484:…
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See also https://github.com/geneontology/go-ontology/issues/11313#issuecomment-151553984
cc @thomaspd
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Per Managers meeting, we decided to hide or otherwise make it clear the sparql endpoint is not officially supported by GO. Need to check/change documentation.
Possibly some useful info on
https…
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From 2024-03-28 call with SwissProt curators and Noctua workbenches call.
We will update the Alliance Pathway Preview to use the latest version that renders models with shared outputs/inputs correc…
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## Describe the issue/bug
Snapshot has not been updated since 17th June.
[http://snapshot.geneontology.org/summary.txt]
We use this for PomBase, and Canto and assume it is the most up-to-date. …
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https://github.com/geneontology/go-annotation/issues/2207
create a new rule
DNA-binding transcription factor activity (GO:0003700) should NOT be also annotated to catalytic activity (GO:000382…
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Hi @ValWood @sylvainpoux @vanaukenk
Do you know what is the difference between 'GO:0030968 endoplasmic reticulum unfolded protein response' and 'GO:0006984 ER-nucleus signaling pathway'? They have…
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##### Project link
https://github.com/orgs/geneontology/projects/TBD
##### Project description
The aim of this project is to align the existing models with the new relations documentation: https:…
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I noticed that interactions of types "indirectly positively/negatively regulates" and "constitutively upstream of" are not rendered in the Alliance pathway preview.
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Links go to
https://proconsortium.org/cgi-bin/pro/entry_pro?id=PR:000050512
should go to
https://proconsortium.org/cgi-bin/entry_pro?id=PR_000050512