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In [`b9659a9`](https://github.com/Sulstice/Uptime-Medical-Informatics/commit/b9659a98256c13ff9bd0c7ff9c8c909579d40ac4
), ITK Analysis of Large Histology Datasets (http://www.na-mic.org/Wiki/index.php/…
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Bioimaging Challenge 2015 Breast Histology Dataset
need unzip password, Can you provide password to me.
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#### What analysis module should be updated and why?
An incorrect matching here:
https://github.com/AlexsLemonade/OpenPBTA-analysis/blob/6bf301eea42a7f8812c3b14cee35a961097f8ecf/analyses/indepen…
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It looks like the Patient HM data that was previously here: https://s3.amazonaws.com/patient-hm-august-2017/Histology/HM_1243_FLIPPED_DZ_tif.dzi is no longer accessible. We were using that to showcase…
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Add feature to ADS to make it a BIDS app (i.e. able to read a set of folders configured to the BIDS specifications for histology), such that it can automatically segment the images in all the folders.…
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Fruit development stage ([PO:0001002](http://purl.obolibrary.org/obo/PO_0001002)) was a subtype of collective plant structure development stage, but has moved to be direct subtype of plant structure d…
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Hi @paulbrodersen,
I'm sure you've seen these, but I wanted to collect similar projects in one place that could be potentially useful (mostly matlab):
* [SHARP-Track](https://github.com/cortex-l…
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Currently the code created adds the ambiguous ICDO site/histology combinations to a stand-alone table. The goal is to add it to the vocabulary.
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**AIM:** Add/modify keys in the ivadomed json config file for dealing with microscopy data
Add parameters relative to histology data, examples:
- overlap for inference
- general pixel size (resam…
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Hi Jingyi! The software has been working great so far; thank you for being so responsive.
Is it possible at all the save the registration points or transformation after aligning a histological slic…