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The Alliance expression working group is planning to use the UBERON terms "digestive system" and "hepatobiliary system" in the gene expression anatomy ribbon. The concensus in the group, also reflect…
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Links to metaproteomic public repositories
IDEA:
It would be a good idea to add a few common publically available metaproteomics databases (see HOMD database for an example below) to the Protein…
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This is output of treefmt run on clean checkout of my $dayjob repository:
```
>> treefmt
traversed 3563 files
matched 1102 files to formatters
left with 0 files after cache
of whom 0 files w…
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Hi:)
I ran kraken2.1.2 for my mice gut microbiome shotgun metagenomic analysis. I built a custom db by using the following command
```
kraken2-build --download-taxonomy --db refseq
kraken2-build …
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**Errors**
**TONS of errors due to underscore instead of colon used with uberon ID**
Example: WARNING - Unrecognised cell content 'UBERON_0000314'
**This looks like it should result in New term…
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Hello,
First of all thank you for all of your hard work developing such an informative and intuitive tool.
I have been successful in running the LEfSE analyses for some of my data, but unfortunat…
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This should probably be restricted to maintainers - i.e. time to first comment from a maintainer. However, that could be tricky in bot-controlled collections community.general
@gundalow is communit…
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Hi Francisco,
Thanks so much for taking the time to develop these great tutorials.
In my project I am comparing two groups of species (Entero co-colonizers vs co-excluders) and have identified a…
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I’m getting spam emails despite having the honeypot setting checked, so I was going to see what I can do. Is the honeypot field that hidden checkbox with name “p01-contact_fields[totally_legit]”? I ha…
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When we have proper data in the payload for the tabs on the experiment page the tabs should be appear on the page.
Currently none of the tab is appearing for `E-ANND-3` experiment given the following …