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@joshuamutio @Jongmassey - lets aim to discuss this when we meet tomorrow
From the research i have done this is going to be hugely challenging.
There is clearly a huge spectrum of disease both i…
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### Summary
Mixed infections can cause difficulties when analysing wgs data. Improved support for mixed infection data as well as mutation phasing will be implemented.
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We will assert that in instances of complex infection, one infection becomes the founding dominant infection while the remaining infections are co-incident and inhibited relative to their predicted in…
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Although I still plan to switch to a more sophisticated model in the future, for the first web-version we need some fine-tuning. This is more for the look and feel, since intrinsically this work real…
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## Bug report
| Question | Answer
| ------------| ---------------
| Box version | 3.14.0
| PHP version | 8.0
| Github Repo | https://github.com/infection/infection/pull/1623
Box fails com…
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```
Make support for slow infection with at least these modes. They can be
made as immunity modes on classes too:
1. Infection delayed n seconds. Class or CVAR configured? Maybe both.
2. Do not get …
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- cure status
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#### Description of issue
This, on paper, makes the bar a more valuable resource for those paranoidly inclined, and would provide a proper counter for when some sick fuck inevitably adds Malaria …
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```
Make support for slow infection with at least these modes. They can be
made as immunity modes on classes too:
1. Infection delayed n seconds. Class or CVAR configured? Maybe both.
2. Do not get …
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