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This looks like a typo in the config
toolshed.g2.bx.psu.edu/repos/iuc/anndata_import/anndata_import/0.10.3+galaxy0
native_specification --nodes=1 --ntasks=1 **--mem=277** --time=36:00:00 --parti…
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When using the JBrowse tool in a large workflow, we have a couple of analysis paths that can end in an empty file when added as an evidence track depending on the features found in the given sequence.…
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Tools that define input parameters that are not used in the command or anywhere else:
- [ ] tools/hisat/hisat.xml
- ignore_quals
- min_intron
- max_intron
In this case the tool could al…
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Problems described along with test history here: https://github.com/galaxyproject/tools-iuc/issues/1921
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Hi IUC.
Could you please have a look at https://github.com/galaxyproject/tools-iuc/pull/3859
It's the old discussion about the security of RData objects. Do we allow in IUC tools RData as input …
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There is a bug in the Jbrowse code.
Line 658 of jbrowse.py located in /mnt/galaxy/shed_tools/toolshed.../repos/iuc/jbrowse/.../jbrowse/: The double quotes ("") need to be removed from around the cu…
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Hi,
I tried to install DeepTools :
- Revision: 5693283f4de2
- Owner: bgruening
but it failed because of many `Installed, missing tool dependencies` as shown below:
 is great.
We are using it and seeing a lot of use of it. I know one can set the Withd x Height in pixels, which…