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- [ ] is the thought that children below the bolded box in anatomical_entity_environment-excluded-from-env_local_scale.png should be covered by corresponding biomes which would go in env_broad_scale?…
aclum updated
2 months ago
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The `check-links` job is failing.
I checked the "Actions" tab on GitHub to see when the most recent passing run occurred, and did not see _any_ passing runs.
https://github.com/microbiomedata/NM…
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Initial mapping of DMS slots are underway. After issues #748 and #749 have been completed:
- [x] Finalize mapping spreadhseet including:
- [x] Add MassSpectrometryConfiguration ids to all MassSpec…
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For
- https://github.com/microbiomedata/nmdc-ontology/issues/66
specifically
- https://github.com/microbiomedata/nmdc-ontology/issues/66#issuecomment-2037310976
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- https://github.com/microbiomedata/submission-schema/blob/8dada667c343c76112a5b7563189361815eecd3a/project.Makefile#L208
- https://github.com/microbiomedata/submission-schema/blob/8dada667c343c76112…
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Depends on https://github.com/microbiomedata/nmdc_automation/issues/222
logic will need to be added to decide what workflow component to run for nmdc:MetatranscriptomeExpressionAnalysis.
nmdc:Me…
aclum updated
1 month ago
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perhaps:
- https://github.com/microbiomedata/berkeley-schema-fy24/blob/main/nmdc_schema/build_datafile_from_api_requests.py
- `build-datafile-from-api-requests = "nmdc_schema.build_datafile_from…
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**Deliverable this task is associated with**
_See Deliverables tab here: _
- [Add the Deliverable #]
**RACI**
_Tag people in their roles_
- Responsible: @kaijli @vlilanl
- Accountable…
aclum updated
2 weeks ago
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1000 soils has metaG data generated from JGI and from Genewiz
16 : # of samples run at JGI : See https://github.com/microbiomedata/issues/issues/85
- [x] Map JGI samples to NMDC biosamples
- [x] Up…
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Can we make the following terms `recommended: true` instead of `required: true`?
* execution_resource: https://microbiomedata.github.io/nmdc-schema/execution_resource/
* git_url: https://microbiom…