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I tried haplochecker with my own alignments (long PacBio amplicons) and got the following error. To test whether it due to our data, I downloaded the [HG96 test data](https://github.com/seppinho/mtdn…
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Hi, I'm doing **variant calling from my RNAseq** data on a cell line (Paired End 2X100b, Illumina)
I'm following GATK workflows and everything is working almost fine since I can find all the expected…
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### Bug description
I've decided to try embedding mongodb documents with the [new update](https://www.mongodb.com/community/forums/t/prisma-orm-odm-v3-10-0-adds-support-for-embedded-documents/149381)…
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**Describe the bug**
In the process of ID-mapping with the tool, the error in the screenshot below appeared. In my previous work, I have never encountered it. Excuse me, how can I find the ID in ques…
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I've noticed that some gene names have been converted to dates in `PANCAN_mutation` ([version info](https://github.com/dhimmel/cancer-data/blob/ffe66ab26000379adcd7138b8ff39920d4692ef1/download/PANCAN…
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### Amplify CLI Version
12.2.5
### Question
I can successfully add Appsync JS resolvers for any field in my api schema. However, if I try and add my own resolver for a Query such as getRegist…
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We have a use case where pods are created with a single label that is a reference to an ID in another system. We want to take data from that system (based on that ID) and add several (1-20 labels) to …
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1. hotspot region in result :
1e96 HNSC 0:A:116;0:A:159;0:A:18;0:B:102;0:A:29;0:A:15
What does 0 mean? What does A/B stand for?
2. How to know the correspondence between genes and hotspo…
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Suggested [here](https://github.com/choderalab/perses/pull/763#issuecomment-778444546).
We should test the examples as part of CI.
For notebooks, we can use [nbval](https://github.com/computation…
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The `PANCAN_mutation` dataset ([online doc](https://genome-cancer.soe.ucsc.edu/proj/site/xena/datapages/?dataset=TCGA.PANCAN.sampleMap/PANCAN_mutation&host=https://tcga.xenahubs.net)) contains several…